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  • Getting Started
  • Tutorials
  • Manual
  • Contributing
  • Citing
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Section Navigation

  • pept.read_csv
  • pept.load
  • pept.save
  • pept.LineData
  • pept.PointData
  • pept.Pixels
  • pept.Voxels
  • pept.Pipeline
  • pept.TimeWindow
  • pept.AdaptiveWindow

Submodules

  • Base / Abstract Classes (pept.base)
    • pept.base.PEPTObject
    • pept.base.IterableSamples
    • pept.base.Transformer
    • pept.base.Filter
    • pept.base.Reducer
    • pept.base.PointDataFilter
    • pept.base.LineDataFilter
    • pept.base.VoxelsFilter
  • Initialising Scanner Data (pept.scanners)
    • pept.scanners.adac_forte
    • pept.scanners.parallel_screens
    • pept.scanners.ADACGeometricEfficiency
    • pept.scanners.modular_camera
  • Tracking Algorithms (pept.tracking)
    • pept.tracking.Debug
    • pept.tracking.OptimizeWindow
    • pept.tracking.Stack
    • pept.tracking.SplitLabels
    • pept.tracking.SplitAll
    • pept.tracking.GroupBy
    • pept.tracking.Centroids
    • pept.tracking.LinesCentroids
    • pept.tracking.Condition
    • pept.tracking.SamplesCondition
    • pept.tracking.Remove
    • pept.tracking.Swap
    • pept.tracking.Voxelize
    • pept.tracking.Interpolate
    • pept.tracking.Reorient
    • pept.tracking.OutOfViewFilter
    • pept.tracking.RemoveStatic
    • pept.tracking.BirminghamMethod
    • pept.tracking.Cutpoints
    • pept.tracking.Minpoints
    • pept.tracking.HDBSCAN
    • pept.tracking.FPI
    • pept.tracking.Segregate
    • pept.tracking.Reconnect
    • pept.tracking.TimeOfFlight
    • pept.tracking.CutpointsToF
    • pept.tracking.GaussianDensity
    • pept.tracking.Velocity
  • Post Processing (pept.processing)
    • pept.processing.DynamicProbability2D
    • pept.processing.DynamicProbability3D
    • pept.processing.ResidenceDistribution2D
    • pept.processing.ResidenceDistribution3D
    • pept.processing.VectorField2D
    • pept.processing.VectorGrid2D
    • pept.processing.VectorField3D
    • pept.processing.VectorGrid3D
    • pept.processing.LaceyColors
    • pept.processing.LaceyColorsLinear
    • pept.processing.RelativeDeviations
    • pept.processing.RelativeDeviationsLinear
    • pept.processing.AutoCorrelation
    • pept.processing.SpatialProjections
  • Visualisation (pept.plots)
    • pept.plots.format_fig
    • pept.plots.histogram
    • pept.plots.make_video
    • pept.plots.PlotlyGrapher
    • pept.plots.PlotlyGrapher2D
  • pept.utilities
    • pept.utilities.find_cutpoints
    • pept.utilities.find_minpoints
    • pept.utilities.group_by_column
    • pept.utilities.number_of_lines
    • pept.utilities.read_csv
    • pept.utilities.read_csv_chunks
    • pept.utilities.parallel_map_file
    • pept.utilities.traverse2d
    • pept.utilities.traverse3d
    • pept.utilities.ChunkReader
  • pept.simulation
    • pept.simulation.Simulator
  • Manual
  • pept.simulation

pept.simulation#

pept.simulation.Simulator(trajectory, ...[, ...])

Simulate PEPT data.

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pept.simulation.Simulator
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